Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 AL355075.4-201ENST00000554988 638 ntBASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 AC011298.2-201ENST00000617989 482 ntBASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.93■□□□□ 0.62
DNMT3AQ9Y6K1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 RBM17P1-201ENST00000453646 1190 ntBASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 AC091390.4-202ENST00000476426 537 ntBASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DNMT3AQ9Y6K1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 KRT8P41-201ENST00000533985 1514 ntBASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DNMT3AQ9Y6K1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 LINC01465-201ENST00000408887 1940 ntBASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 FAM207BP-201ENST00000447172 505 ntBASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DNMT3AQ9Y6K1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
DNMT3AQ9Y6K1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
DNMT3AQ9Y6K1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms