Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 TSPY14P-201ENST00000303979 915 ntBASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AC128688.1-201ENST00000487626 519 ntBASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 PCDHAC2-203ENST00000615316 3011 ntBASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 AC005521.1-201ENST00000393351 872 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 MIR1224-201ENST00000408193 85 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 AC113347.1-201ENST00000413321 391 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 TMPOP1-202ENST00000424642 1267 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 AL137013.1-201ENST00000432946 1228 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 SLC25A3P1-201ENST00000443844 931 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 RN7SL850P-201ENST00000579959 291 ntBASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00588Q9Y4M8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 ECEL1P2-202ENST00000465689 757 ntBASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 AC104417.2-201ENST00000562989 1793 ntBASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00588Q9Y4M8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00588Q9Y4M8 ZNF815P-204ENST00000434898 1737 ntBASIC13.21□□□□□ -0.3
LINC00588Q9Y4M8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LINC00588Q9Y4M8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00588Q9Y4M8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC00588Q9Y4M8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms