Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 DNAJB3-201ENST00000446806 729 ntBASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 NUS1P2-201ENST00000417358 873 ntBASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 AL136038.4-201ENST00000603606 1261 ntBASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 FAM197Y3-203ENST00000618346 717 ntBASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN3Q9BTN0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 METTL21AP1-201ENST00000438852 635 ntBASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
LRFN3Q9BTN0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 MED15P5-201ENST00000423150 992 ntBASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 AC018712.1-201ENST00000455767 687 ntBASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 AC116407.3-201ENST00000623905 1129 ntBASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN3Q9BTN0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 KRT16P6-202ENST00000425692 1426 ntBASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 KRT8P41-201ENST00000533985 1514 ntBASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 Z83836.1-201ENST00000624605 1642 ntBASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.27■□□□□ 0.68
LRFN3Q9BTN0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.27■□□□□ 0.67
LRFN3Q9BTN0 AL391807.1-203ENST00000604392 2365 ntBASIC19.27■□□□□ 0.67
LRFN3Q9BTN0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms