Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 NIFKP9-201ENST00000419265 221 ntBASIC16.18■□□□□ 0.18
CCL13Q99616 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.18■□□□□ 0.18
CCL13Q99616 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.18■□□□□ 0.18
CCL13Q99616 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.18■□□□□ 0.18
CCL13Q99616 AC073195.1-201ENST00000607241 877 ntBASIC16.18■□□□□ 0.18
CCL13Q99616 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.18■□□□□ 0.18
CCL13Q99616 CR392000.1-201ENST00000624770 1228 ntBASIC16.18■□□□□ 0.18
CCL13Q99616 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 ZNF815P-204ENST00000434898 1737 ntBASIC16.18■□□□□ 0.18
CCL13Q99616 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL13Q99616 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCL13Q99616 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL13Q99616 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL13Q99616 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCL13Q99616 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCL13Q99616 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 MIR718-201ENST00000390190 70 ntBASIC16.17■□□□□ 0.18
CCL13Q99616 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL13Q99616 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.17■□□□□ 0.18
CCL13Q99616 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 AL353708.3-201ENST00000610272 989 ntBASIC16.17■□□□□ 0.18
CCL13Q99616 AC066615.1-201ENST00000640911 628 ntBASIC16.17■□□□□ 0.18
CCL13Q99616 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CCL13Q99616 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL13Q99616 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 AC007952.6-201ENST00000573168 2673 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 AC003957.1-201ENST00000625108 2673 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.16■□□□□ 0.18
CCL13Q99616 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 FAM197Y1-201ENST00000421178 764 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 AC012618.2-201ENST00000428058 849 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 KSR1P1-201ENST00000446298 240 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.16■□□□□ 0.18
CCL13Q99616 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 AC233702.5-201ENST00000584107 538 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 AP001412.1-201ENST00000608405 714 ntBASIC16.16■□□□□ 0.18
CCL13Q99616 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CCL13Q99616 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL13Q99616 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL13Q99616 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL13Q99616 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCL13Q99616 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL13Q99616 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCL13Q99616 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCL13Q99616 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 AC093827.2-201ENST00000512654 315 ntBASIC16.15■□□□□ 0.18
CCL13Q99616 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.15■□□□□ 0.18
CCL13Q99616 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL13Q99616 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.15■□□□□ 0.18
CCL13Q99616 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.15■□□□□ 0.18
CCL13Q99616 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms