Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 AC004854.2-201ENST00000608450 1441 ntBASIC15.66■□□□□ 0.1
RAB40CQ96S21 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 TERF1P5-201ENST00000477545 1207 ntBASIC15.65■□□□□ 0.1
RAB40CQ96S21 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 AC023632.3-201ENST00000521633 145 ntBASIC15.65■□□□□ 0.1
RAB40CQ96S21 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 AC105020.6-201ENST00000621523 1217 ntBASIC15.65■□□□□ 0.1
RAB40CQ96S21 MYCNOS-205ENST00000641950 531 ntBASIC15.65■□□□□ 0.1
RAB40CQ96S21 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 BICD1-207ENST00000551848 1962 ntBASIC15.65■□□□□ 0.1
RAB40CQ96S21 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 AC005332.8-201ENST00000622750 2735 ntBASIC15.65■□□□□ 0.1
RAB40CQ96S21 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40CQ96S21 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB40CQ96S21 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 UBE2DNL-204ENST00000602536 740 ntBASIC15.64■□□□□ 0.09
RAB40CQ96S21 MIR6821-201ENST00000617625 74 ntBASIC15.64■□□□□ 0.09
RAB40CQ96S21 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.64■□□□□ 0.09
RAB40CQ96S21 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40CQ96S21 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB40CQ96S21 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 AC034268.1-201ENST00000441047 882 ntBASIC15.63■□□□□ 0.09
RAB40CQ96S21 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40CQ96S21 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms