Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CALR3Q96L12 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.4■□□□□ 0.86
CALR3Q96L12 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.4■□□□□ 0.86
CALR3Q96L12 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.4■□□□□ 0.86
CALR3Q96L12 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.4■□□□□ 0.86
CALR3Q96L12 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.4■□□□□ 0.86
CALR3Q96L12 AC091874.3-201ENST00000512672 1195 ntBASIC20.4■□□□□ 0.86
CALR3Q96L12 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.4■□□□□ 0.86
CALR3Q96L12 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.4■□□□□ 0.86
CALR3Q96L12 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.4■□□□□ 0.86
CALR3Q96L12 AL121832.2-201ENST00000610979 668 ntBASIC20.4■□□□□ 0.86
CALR3Q96L12 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CALR3Q96L12 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CALR3Q96L12 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CALR3Q96L12 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.39■□□□□ 0.86
CALR3Q96L12 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CALR3Q96L12 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CALR3Q96L12 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CALR3Q96L12 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.39■□□□□ 0.86
CALR3Q96L12 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CALR3Q96L12 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CALR3Q96L12 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CALR3Q96L12 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.39■□□□□ 0.85
CALR3Q96L12 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.39■□□□□ 0.85
CALR3Q96L12 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.39■□□□□ 0.85
CALR3Q96L12 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.39■□□□□ 0.85
CALR3Q96L12 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.39■□□□□ 0.85
CALR3Q96L12 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.39■□□□□ 0.85
CALR3Q96L12 HLA-B-256ENST00000639848 1089 ntBASIC20.39■□□□□ 0.85
CALR3Q96L12 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.39■□□□□ 0.85
CALR3Q96L12 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CALR3Q96L12 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CALR3Q96L12 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CALR3Q96L12 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CALR3Q96L12 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 MIR663A-201ENST00000385250 93 ntBASIC20.38■□□□□ 0.85
CALR3Q96L12 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 KRT18P16-201ENST00000510337 1294 ntBASIC20.38■□□□□ 0.85
CALR3Q96L12 AC092437.1-201ENST00000624794 1048 ntBASIC20.38■□□□□ 0.85
CALR3Q96L12 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
CALR3Q96L12 Z98044.1-201ENST00000632503 1764 ntBASIC20.38■□□□□ 0.85
CALR3Q96L12 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CALR3Q96L12 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALR3Q96L12 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.37■□□□□ 0.85
CALR3Q96L12 AC120498.9-201ENST00000339021 3867 ntBASIC20.37■□□□□ 0.85
CALR3Q96L12 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CALR3Q96L12 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.37■□□□□ 0.85
CALR3Q96L12 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALR3Q96L12 AL121829.2-201ENST00000620908 328 ntBASIC20.37■□□□□ 0.85
CALR3Q96L12 AC006557.6-201ENST00000623071 864 ntBASIC20.37■□□□□ 0.85
CALR3Q96L12 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.37■□□□□ 0.85
CALR3Q96L12 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms