Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 AL160237.2-201ENST00000556165 472 ntBASIC16.37■□□□□ 0.21
SPG11Q96JI7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 TMEM179-206ENST00000616017 1645 ntBASIC16.37■□□□□ 0.21
SPG11Q96JI7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 AL121672.3-201ENST00000608644 468 ntBASIC16.36■□□□□ 0.21
SPG11Q96JI7 AC016734.2-201ENST00000624325 1377 ntBASIC16.36■□□□□ 0.21
SPG11Q96JI7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 HLA-F-220ENST00000434407 884 ntBASIC16.36■□□□□ 0.21
SPG11Q96JI7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 AP002469.2-201ENST00000531724 424 ntBASIC16.36■□□□□ 0.21
SPG11Q96JI7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.36■□□□□ 0.21
SPG11Q96JI7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPG11Q96JI7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 AC004870.1-201ENST00000315132 882 ntBASIC16.35■□□□□ 0.21
SPG11Q96JI7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 AL645929.1-201ENST00000420084 975 ntBASIC16.35■□□□□ 0.21
SPG11Q96JI7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.35■□□□□ 0.21
SPG11Q96JI7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPG11Q96JI7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SPG11Q96JI7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPG11Q96JI7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPG11Q96JI7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPG11Q96JI7 AL117328.2-201ENST00000624617 1940 ntBASIC16.34■□□□□ 0.21
SPG11Q96JI7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 FEM1AP1-201ENST00000431297 1995 ntBASIC16.34■□□□□ 0.21
SPG11Q96JI7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPG11Q96JI7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPG11Q96JI7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.34■□□□□ 0.21
SPG11Q96JI7 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.34■□□□□ 0.21
SPG11Q96JI7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms