Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 AC027796.2-201ENST00000575326 344 ntBASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 AC036111.1-201ENST00000533973 1582 ntBASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 MIR662-201ENST00000384847 95 ntBASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 TERC-201ENST00000602385 541 ntBASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CCDC168Q8NDH2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 AC093525.10-201ENST00000625130 1569 ntBASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 AC138894.3-201ENST00000603787 634 ntBASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC168Q8NDH2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 RNF126P1-202ENST00000569893 925 ntBASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 AC005104.2-201ENST00000427818 678 ntBASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 FOSL1P1-201ENST00000511041 816 ntBASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC168Q8NDH2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 MIR564-202ENST00000385049 94 ntBASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms