Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 SPDYE15P-201ENST00000424157 909 ntBASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 SPDYE13P-201ENST00000445314 798 ntBASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A3Q8N4M1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 KRT8P11-201ENST00000409686 1436 ntBASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 AC007375.3-201ENST00000600936 2314 ntBASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 AC246785.2-201ENST00000432512 513 ntBASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 AC092119.3-201ENST00000612618 583 ntBASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC44A3Q8N4M1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A3Q8N4M1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A3Q8N4M1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 MIR3652-201ENST00000579335 131 ntBASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A3Q8N4M1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 HBZP1-201ENST00000354915 429 ntBASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms