Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 AC104771.1-201ENST00000603335 964 ntBASIC21.46■■□□□ 1.03
DHX40Q8IX18 AL109923.1-201ENST00000618799 583 ntBASIC21.46■■□□□ 1.03
DHX40Q8IX18 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 AC018470.1-201ENST00000624790 3129 ntBASIC21.46■■□□□ 1.03
DHX40Q8IX18 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
DHX40Q8IX18 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
DHX40Q8IX18 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
DHX40Q8IX18 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 NCF1B-203ENST00000435988 1254 ntBASIC21.45■■□□□ 1.02
DHX40Q8IX18 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 AC005181.1-201ENST00000604782 1256 ntBASIC21.45■■□□□ 1.02
DHX40Q8IX18 AL050303.2-201ENST00000619798 666 ntBASIC21.45■■□□□ 1.02
DHX40Q8IX18 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 AL354751.1-201ENST00000412768 1863 ntBASIC21.45■■□□□ 1.02
DHX40Q8IX18 AL133373.2-201ENST00000623187 2828 ntBASIC21.45■■□□□ 1.02
DHX40Q8IX18 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHX40Q8IX18 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.44■■□□□ 1.02
DHX40Q8IX18 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHX40Q8IX18 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.43■■□□□ 1.02
DHX40Q8IX18 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
DHX40Q8IX18 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.43■■□□□ 1.02
DHX40Q8IX18 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DHX40Q8IX18 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.43■■□□□ 1.02
DHX40Q8IX18 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DHX40Q8IX18 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.43■■□□□ 1.02
DHX40Q8IX18 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DHX40Q8IX18 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 LSM12P1-201ENST00000411836 588 ntBASIC21.42■■□□□ 1.02
DHX40Q8IX18 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
DHX40Q8IX18 AC124283.5-201ENST00000624661 1809 ntBASIC21.42■■□□□ 1.02
DHX40Q8IX18 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DHX40Q8IX18 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms