Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL512408.1-201ENST00000569378 2000 ntBASIC20.3■□□□□ 0.84
CCDC149Q6ZUS6 AL691432.2-201ENST00000607222 2038 ntBASIC20.3■□□□□ 0.84
CCDC149Q6ZUS6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC149Q6ZUS6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC149Q6ZUS6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC149Q6ZUS6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC149Q6ZUS6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 AL671277.2-201ENST00000458060 996 ntBASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 PRSS44-201ENST00000515154 1146 ntBASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 AC140113.3-201ENST00000605663 199 ntBASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC149Q6ZUS6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AL359075.1-203ENST00000462729 1002 ntBASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 AC007375.3-201ENST00000600936 2314 ntBASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC149Q6ZUS6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC149Q6ZUS6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC149Q6ZUS6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC149Q6ZUS6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.83
CCDC149Q6ZUS6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 AL162377.1-201ENST00000618844 1793 ntBASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms