Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 AL023875.1-201ENST00000640777 796 ntBASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST2H2AA3Q6FI13 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
HIST2H2AA3Q6FI13 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 KRASP1-201ENST00000407852 552 ntBASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 AC233263.1-201ENST00000578059 224 ntBASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H2AA3Q6FI13 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 POU5F1P3-201ENST00000428824 1078 ntBASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 FAM201B-201ENST00000458407 597 ntBASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 RN7SL471P-201ENST00000580476 299 ntBASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 AC073648.6-201ENST00000641589 218 ntBASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST2H2AA3Q6FI13 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H2AA3Q6FI13 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H2AA3Q6FI13 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H2AA3Q6FI13 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms