Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.3■■□□□ 1
ATN1P54259 BX276092.5-203ENST00000456199 560 ntBASIC21.3■■□□□ 1
ATN1P54259 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 MIR3180-1-201ENST00000580374 94 ntBASIC21.3■■□□□ 1
ATN1P54259 MIR3180-3-201ENST00000584616 94 ntBASIC21.3■■□□□ 1
ATN1P54259 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 AC023511.2-201ENST00000618803 211 ntBASIC21.3■■□□□ 1
ATN1P54259 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 AC016734.2-201ENST00000624325 1377 ntBASIC21.3■■□□□ 1
ATN1P54259 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
ATN1P54259 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.3■■□□□ 1
ATN1P54259 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.3■■□□□ 1
ATN1P54259 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ATN1P54259 KRT8P11-201ENST00000409686 1436 ntBASIC21.29■■□□□ 1
ATN1P54259 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.29■■□□□ 1
ATN1P54259 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.29■■□□□ 1
ATN1P54259 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.29■■□□□ 1
ATN1P54259 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.29■■□□□ 1
ATN1P54259 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.29■■□□□ 1
ATN1P54259 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.29■■□□□ 1
ATN1P54259 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.29■■□□□ 1
ATN1P54259 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
ATN1P54259 MIR4674-201ENST00000582457 87 ntBASIC21.29■■□□□ 1
ATN1P54259 AC011498.5-201ENST00000592027 486 ntBASIC21.29■■□□□ 1
ATN1P54259 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 AC006538.3-201ENST00000612495 578 ntBASIC21.29■■□□□ 1
ATN1P54259 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATN1P54259 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.28■■□□□ 1
ATN1P54259 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATN1P54259 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.28■■□□□ 1
ATN1P54259 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATN1P54259 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATN1P54259 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.28■■□□□ 1
ATN1P54259 RASA4DP-201ENST00000460726 1199 ntBASIC21.28■■□□□ 1
ATN1P54259 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC21.28■■□□□ 1
ATN1P54259 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATN1P54259 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.28■■□□□ 1
ATN1P54259 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.28■■□□□ 1
ATN1P54259 AL121672.3-201ENST00000608644 468 ntBASIC21.28■■□□□ 1
ATN1P54259 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.28■■□□□ 1
ATN1P54259 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATN1P54259 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATN1P54259 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATN1P54259 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ATN1P54259 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.27■■□□□ 1
ATN1P54259 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATN1P54259 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.27■■□□□ 1
ATN1P54259 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATN1P54259 AP002383.4-201ENST00000442518 975 ntBASIC21.27■■□□□ 1
ATN1P54259 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
ATN1P54259 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.27■■□□□ 1
ATN1P54259 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.27■■□□□ 1
ATN1P54259 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.27■■□□□ 1
ATN1P54259 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATN1P54259 IFNL4P1-201ENST00000607083 540 ntBASIC21.27■■□□□ 1
ATN1P54259 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.27■■□□□ 1
ATN1P54259 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATN1P54259 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
ATN1P54259 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATN1P54259 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.27■■□□□ 1
ATN1P54259 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.27■■□□□ 1
ATN1P54259 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATN1P54259 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.27■□□□□ 0.99
ATN1P54259 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATN1P54259 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.27■□□□□ 0.99
ATN1P54259 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.26■□□□□ 0.99
ATN1P54259 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.26■□□□□ 0.99
ATN1P54259 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 EP400NL-214ENST00000641289 2402 ntBASIC21.26■□□□□ 0.99
ATN1P54259 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ATN1P54259 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATN1P54259 EMBP1-201ENST00000458200 901 ntBASIC21.26■□□□□ 0.99
ATN1P54259 AC098799.1-201ENST00000504752 800 ntBASIC21.26■□□□□ 0.99
ATN1P54259 AC004263.2-201ENST00000617183 678 ntBASIC21.26■□□□□ 0.99
ATN1P54259 BX119927.1-201ENST00000636596 1552 ntBASIC21.26■□□□□ 0.99
ATN1P54259 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATN1P54259 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATN1P54259 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 AL022342.1-201ENST00000400363 863 ntBASIC21.25■□□□□ 0.99
ATN1P54259 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms