Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 AC104819.1-201ENST00000504587 486 ntBASIC17.66■□□□□ 0.42
ATRXP46100 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.66■□□□□ 0.42
ATRXP46100 AP000867.3-201ENST00000524675 377 ntBASIC17.66■□□□□ 0.42
ATRXP46100 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.66■□□□□ 0.42
ATRXP46100 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.66■□□□□ 0.42
ATRXP46100 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
ATRXP46100 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATRXP46100 CHCHD2P8-201ENST00000429873 447 ntBASIC17.65■□□□□ 0.42
ATRXP46100 RASA4DP-201ENST00000460726 1199 ntBASIC17.65■□□□□ 0.42
ATRXP46100 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.65■□□□□ 0.42
ATRXP46100 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.65■□□□□ 0.42
ATRXP46100 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.65■□□□□ 0.42
ATRXP46100 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.65■□□□□ 0.42
ATRXP46100 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
ATRXP46100 AL035252.4-201ENST00000624174 288 ntBASIC17.65■□□□□ 0.42
ATRXP46100 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.65■□□□□ 0.42
ATRXP46100 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.65■□□□□ 0.42
ATRXP46100 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.65■□□□□ 0.42
ATRXP46100 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 AC243591.1-201ENST00000452967 1364 ntBASIC17.65■□□□□ 0.42
ATRXP46100 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATRXP46100 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.64■□□□□ 0.42
ATRXP46100 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATRXP46100 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ATRXP46100 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATRXP46100 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATRXP46100 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ATRXP46100 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
ATRXP46100 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATRXP46100 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.64■□□□□ 0.41
ATRXP46100 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.64■□□□□ 0.41
ATRXP46100 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.64■□□□□ 0.41
ATRXP46100 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATRXP46100 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.64■□□□□ 0.41
ATRXP46100 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.64■□□□□ 0.41
ATRXP46100 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.64■□□□□ 0.41
ATRXP46100 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
ATRXP46100 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.64■□□□□ 0.41
ATRXP46100 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATRXP46100 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATRXP46100 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.63■□□□□ 0.41
ATRXP46100 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
ATRXP46100 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.63■□□□□ 0.41
ATRXP46100 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.63■□□□□ 0.41
ATRXP46100 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.63■□□□□ 0.41
ATRXP46100 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATRXP46100 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
ATRXP46100 KRT8P41-201ENST00000533985 1514 ntBASIC17.63■□□□□ 0.41
ATRXP46100 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 GPX1P2-201ENST00000429271 606 ntBASIC17.63■□□□□ 0.41
ATRXP46100 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.63■□□□□ 0.41
ATRXP46100 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.63■□□□□ 0.41
ATRXP46100 AL024507.2-201ENST00000606070 2574 ntBASIC17.63■□□□□ 0.41
ATRXP46100 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATRXP46100 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
ATRXP46100 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATRXP46100 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATRXP46100 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATRXP46100 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATRXP46100 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.62■□□□□ 0.41
ATRXP46100 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.62■□□□□ 0.41
ATRXP46100 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.62■□□□□ 0.41
ATRXP46100 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.62■□□□□ 0.41
ATRXP46100 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.62■□□□□ 0.41
ATRXP46100 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ATRXP46100 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ATRXP46100 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.62■□□□□ 0.41
ATRXP46100 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATRXP46100 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATRXP46100 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATRXP46100 AL136038.4-201ENST00000603606 1261 ntBASIC17.62■□□□□ 0.41
ATRXP46100 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms