Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.38■■□□□ 1.65
RXRBP28702 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.38■■□□□ 1.65
RXRBP28702 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC25.38■■□□□ 1.65
RXRBP28702 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC25.38■■□□□ 1.65
RXRBP28702 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC25.38■■□□□ 1.65
RXRBP28702 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC25.38■■□□□ 1.65
RXRBP28702 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RXRBP28702 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC25.38■■□□□ 1.65
RXRBP28702 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC25.38■■□□□ 1.65
RXRBP28702 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC25.38■■□□□ 1.65
RXRBP28702 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.38■■□□□ 1.65
RXRBP28702 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25.38■■□□□ 1.65
RXRBP28702 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.38■■□□□ 1.65
RXRBP28702 UBC-206ENST00000538617 1303 ntTSL 5 BASIC25.37■■□□□ 1.65
RXRBP28702 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RXRBP28702 Z83836.1-201ENST00000624605 1642 ntBASIC25.37■■□□□ 1.65
RXRBP28702 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RXRBP28702 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.37■■□□□ 1.65
RXRBP28702 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
RXRBP28702 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.37■■□□□ 1.65
RXRBP28702 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RXRBP28702 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC25.37■■□□□ 1.65
RXRBP28702 SART3-203ENST00000546611 1184 ntBASIC25.37■■□□□ 1.65
RXRBP28702 AL049840.3-201ENST00000602669 611 ntBASIC25.37■■□□□ 1.65
RXRBP28702 IGHV3OR16-7-201ENST00000604106 360 ntBASIC25.37■■□□□ 1.65
RXRBP28702 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC25.37■■□□□ 1.65
RXRBP28702 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.37■■□□□ 1.65
RXRBP28702 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
RXRBP28702 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RXRBP28702 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC25.36■■□□□ 1.65
RXRBP28702 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC25.36■■□□□ 1.65
RXRBP28702 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.36■■□□□ 1.65
RXRBP28702 AC112482.1-201ENST00000492080 688 ntBASIC25.36■■□□□ 1.65
RXRBP28702 HLA-J-203ENST00000494367 1087 ntBASIC25.36■■□□□ 1.65
RXRBP28702 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC25.36■■□□□ 1.65
RXRBP28702 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
RXRBP28702 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.36■■□□□ 1.65
RXRBP28702 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RXRBP28702 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.35■■□□□ 1.65
RXRBP28702 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC25.35■■□□□ 1.65
RXRBP28702 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC25.35■■□□□ 1.65
RXRBP28702 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
RXRBP28702 MIR3687-2-201ENST00000577708 61 ntBASIC25.35■■□□□ 1.65
RXRBP28702 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
RXRBP28702 MIR3687-1-201ENST00000614492 61 ntBASIC25.35■■□□□ 1.65
RXRBP28702 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RXRBP28702 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RXRBP28702 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RXRBP28702 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RXRBP28702 LBH-203ENST00000404397 543 ntTSL 4 BASIC25.34■■□□□ 1.65
RXRBP28702 LBH-204ENST00000406087 559 ntTSL 4 BASIC25.34■■□□□ 1.65
RXRBP28702 NUS1P2-201ENST00000417358 873 ntBASIC25.34■■□□□ 1.65
RXRBP28702 FIS1-203ENST00000442303 631 ntTSL 3 BASIC25.34■■□□□ 1.65
RXRBP28702 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RXRBP28702 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC25.34■■□□□ 1.65
RXRBP28702 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC25.34■■□□□ 1.65
RXRBP28702 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC25.34■■□□□ 1.65
RXRBP28702 MIR7706-201ENST00000613747 67 ntBASIC25.34■■□□□ 1.65
RXRBP28702 AC112497.1-201ENST00000624824 639 ntBASIC25.34■■□□□ 1.65
RXRBP28702 AL157888.1-201ENST00000631930 593 ntBASIC25.34■■□□□ 1.65
RXRBP28702 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC25.34■■□□□ 1.65
RXRBP28702 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RXRBP28702 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RXRBP28702 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RXRBP28702 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RXRBP28702 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC25.33■■□□□ 1.65
RXRBP28702 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.33■■□□□ 1.65
RXRBP28702 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RXRBP28702 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
RXRBP28702 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.33■■□□□ 1.65
RXRBP28702 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RXRBP28702 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
RXRBP28702 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC25.33■■□□□ 1.65
RXRBP28702 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RXRBP28702 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms