Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
COL11A2P13942 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL11A2P13942 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL11A2P13942 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.7■■□□□ 1.38
COL11A2P13942 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 TPSP2-201ENST00000561760 610 ntBASIC23.7■■□□□ 1.38
COL11A2P13942 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 AC092329.2-201ENST00000598402 547 ntBASIC23.7■■□□□ 1.38
COL11A2P13942 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.7■■□□□ 1.38
COL11A2P13942 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL11A2P13942 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL11A2P13942 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.69■■□□□ 1.38
COL11A2P13942 GPAT2P1-201ENST00000444924 1672 ntBASIC23.69■■□□□ 1.38
COL11A2P13942 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.69■■□□□ 1.38
COL11A2P13942 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.69■■□□□ 1.38
COL11A2P13942 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.69■■□□□ 1.38
COL11A2P13942 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.69■■□□□ 1.38
COL11A2P13942 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.69■■□□□ 1.38
COL11A2P13942 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.69■■□□□ 1.38
COL11A2P13942 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL11A2P13942 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL11A2P13942 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
COL11A2P13942 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.68■■□□□ 1.38
COL11A2P13942 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL11A2P13942 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL11A2P13942 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL11A2P13942 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL11A2P13942 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.68■■□□□ 1.38
COL11A2P13942 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.68■■□□□ 1.38
COL11A2P13942 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.68■■□□□ 1.38
COL11A2P13942 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.68■■□□□ 1.38
COL11A2P13942 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.68■■□□□ 1.38
COL11A2P13942 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
COL11A2P13942 AC004263.2-201ENST00000617183 678 ntBASIC23.68■■□□□ 1.38
COL11A2P13942 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.68■■□□□ 1.38
COL11A2P13942 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL11A2P13942 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
COL11A2P13942 AP005212.1-201ENST00000581547 1997 ntBASIC23.68■■□□□ 1.38
COL11A2P13942 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
COL11A2P13942 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.68■■□□□ 1.38
COL11A2P13942 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL11A2P13942 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 TSPY12P-201ENST00000421279 868 ntBASIC23.67■■□□□ 1.38
COL11A2P13942 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.67■■□□□ 1.38
COL11A2P13942 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.67■■□□□ 1.38
COL11A2P13942 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
COL11A2P13942 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.67■■□□□ 1.38
COL11A2P13942 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.67■■□□□ 1.38
COL11A2P13942 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL11A2P13942 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL11A2P13942 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.67■■□□□ 1.38
COL11A2P13942 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.67■■□□□ 1.38
COL11A2P13942 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.67■■□□□ 1.38
COL11A2P13942 AC133561.1-201ENST00000568600 2415 ntBASIC23.67■■□□□ 1.38
COL11A2P13942 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL11A2P13942 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.66■■□□□ 1.38
COL11A2P13942 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL11A2P13942 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 AC009078.2-202ENST00000463353 338 ntBASIC23.66■■□□□ 1.38
COL11A2P13942 SEC1P-202ENST00000473944 940 ntBASIC23.66■■□□□ 1.38
COL11A2P13942 AC034232.1-201ENST00000506026 1064 ntBASIC23.66■■□□□ 1.38
COL11A2P13942 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 AL121672.3-201ENST00000608644 468 ntBASIC23.66■■□□□ 1.38
COL11A2P13942 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.66■■□□□ 1.38
COL11A2P13942 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.66■■□□□ 1.38
COL11A2P13942 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL11A2P13942 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.65■■□□□ 1.38
COL11A2P13942 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL11A2P13942 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
COL11A2P13942 TSSC2-201ENST00000450217 709 ntBASIC23.65■■□□□ 1.38
COL11A2P13942 BX276092.5-203ENST00000456199 560 ntBASIC23.65■■□□□ 1.38
COL11A2P13942 EMBP1-201ENST00000458200 901 ntBASIC23.65■■□□□ 1.38
COL11A2P13942 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.65■■□□□ 1.38
COL11A2P13942 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL11A2P13942 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms