Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPDYE15P-201ENST00000424157 909 ntBASIC22■■□□□ 1.11
COL11A1P12107 AL671277.2-201ENST00000458060 996 ntBASIC22■■□□□ 1.11
COL11A1P12107 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22■■□□□ 1.11
COL11A1P12107 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL11A1P12107 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22■■□□□ 1.11
COL11A1P12107 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A1P12107 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
COL11A1P12107 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A1P12107 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22■■□□□ 1.11
COL11A1P12107 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22■■□□□ 1.11
COL11A1P12107 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COL11A1P12107 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A1P12107 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.99■■□□□ 1.11
COL11A1P12107 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A1P12107 PCED1CP-201ENST00000419887 785 ntBASIC21.99■■□□□ 1.11
COL11A1P12107 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 BX664615.1-201ENST00000443558 458 ntBASIC21.99■■□□□ 1.11
COL11A1P12107 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A1P12107 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A1P12107 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A1P12107 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 AC112907.3-201ENST00000577781 2400 ntBASIC21.99■■□□□ 1.11
COL11A1P12107 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
COL11A1P12107 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A1P12107 STARP1-201ENST00000397973 869 ntBASIC21.99■■□□□ 1.11
COL11A1P12107 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A1P12107 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A1P12107 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A1P12107 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.98■■□□□ 1.11
COL11A1P12107 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A1P12107 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.98■■□□□ 1.11
COL11A1P12107 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.98■■□□□ 1.11
COL11A1P12107 AL121956.5-201ENST00000625261 221 ntBASIC21.98■■□□□ 1.11
COL11A1P12107 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL11A1P12107 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL11A1P12107 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A1P12107 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A1P12107 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A1P12107 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A1P12107 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A1P12107 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
COL11A1P12107 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A1P12107 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
COL11A1P12107 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
COL11A1P12107 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A1P12107 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A1P12107 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A1P12107 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.96■■□□□ 1.11
COL11A1P12107 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 DUSP5P1-201ENST00000441325 1139 ntBASIC21.96■■□□□ 1.11
COL11A1P12107 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.96■■□□□ 1.11
COL11A1P12107 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
COL11A1P12107 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL11A1P12107 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
COL11A1P12107 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
COL11A1P12107 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
COL11A1P12107 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.96■■□□□ 1.11
COL11A1P12107 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.96■■□□□ 1.11
COL11A1P12107 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.96■■□□□ 1.11
COL11A1P12107 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms