Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.77■□□□□ 0.28
XRCC2O43543 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.77■□□□□ 0.28
XRCC2O43543 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
XRCC2O43543 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
XRCC2O43543 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.77■□□□□ 0.27
XRCC2O43543 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.77■□□□□ 0.27
XRCC2O43543 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
XRCC2O43543 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
XRCC2O43543 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.76■□□□□ 0.27
XRCC2O43543 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.76■□□□□ 0.27
XRCC2O43543 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.76■□□□□ 0.27
XRCC2O43543 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.76■□□□□ 0.27
XRCC2O43543 AC004264.1-201ENST00000608354 794 ntBASIC16.76■□□□□ 0.27
XRCC2O43543 AC069544.1-201ENST00000609399 999 ntBASIC16.76■□□□□ 0.27
XRCC2O43543 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
XRCC2O43543 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XRCC2O43543 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
XRCC2O43543 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.75■□□□□ 0.27
XRCC2O43543 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.75■□□□□ 0.27
XRCC2O43543 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.75■□□□□ 0.27
XRCC2O43543 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
XRCC2O43543 NBPF21P-201ENST00000425093 1451 ntBASIC16.75■□□□□ 0.27
XRCC2O43543 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
XRCC2O43543 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.75■□□□□ 0.27
XRCC2O43543 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.75■□□□□ 0.27
XRCC2O43543 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.75■□□□□ 0.27
XRCC2O43543 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.75■□□□□ 0.27
XRCC2O43543 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.75■□□□□ 0.27
XRCC2O43543 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
XRCC2O43543 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.75■□□□□ 0.27
XRCC2O43543 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
XRCC2O43543 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
XRCC2O43543 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
XRCC2O43543 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC2O43543 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
XRCC2O43543 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC2O43543 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
XRCC2O43543 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC2O43543 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC2O43543 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.74■□□□□ 0.27
XRCC2O43543 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
XRCC2O43543 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
XRCC2O43543 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms