Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV10A0A0B4J240 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AC096733.2-201ENST00000609937 1394 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 TERF1P1-201ENST00000311003 1181 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 KRT18P57-201ENST00000443599 1254 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AC091390.4-202ENST00000476426 537 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 Z85996.1-201ENST00000494644 937 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AL590326.2-201ENST00000625139 305 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AL512408.1-201ENST00000569378 2000 ntBASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV10A0A0B4J240 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 SLC25A1P2-201ENST00000430693 912 ntBASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TRAV10A0A0B4J240 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms