Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC006333.2-201ENST00000607957 2099 ntBASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC022517.1-201ENST00000592429 346 ntBASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MIR5787-201ENST00000611784 55 ntBASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-7A0A0A0MS04 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 MKRN4P-201ENST00000444706 1521 ntBASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC073210.2-201ENST00000430369 194 ntBASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-7A0A0A0MS04 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.14■□□□□ 0.18
TRBV6-7A0A0A0MS04 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC068880.1-201ENST00000507289 2297 ntBASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 AL390719.1-204ENST00000412397 1219 ntBASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms