Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 AC104417.2-201ENST00000562989 1793 ntBASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 YBX1P10-201ENST00000444752 975 ntBASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 SOX15-203ENST00000570788 1093 ntBASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 AL109923.1-201ENST00000618799 583 ntBASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.48■□□□□ 0.39
TRAV27A0A087WT01 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 KRT8P8-201ENST00000434750 1448 ntBASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 AC120498.8-201ENST00000614275 531 ntBASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV27A0A087WT01 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms