Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC026422.1-201ENST00000623961 452 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AP002907.1-201ENST00000606361 1430 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SNORA73.1-201ENST00000363107 205 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SNORD82-201ENST00000365530 70 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SNORD116-2-201ENST00000384274 95 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SNORD116-6-201ENST00000384711 96 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC083875.1-201ENST00000419509 405 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 OFD1P18Y-201ENST00000420889 959 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC093698.1-201ENST00000423843 571 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL590103.1-201ENST00000434488 307 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SNRPEP7-201ENST00000438350 220 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC012512.1-201ENST00000446594 718 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 USP9YP34-201ENST00000453983 808 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL356981.1-201ENST00000454879 684 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC091685.2-201ENST00000454924 864 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 RPS17P2-201ENST00000461663 408 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC092324.1-201ENST00000468671 324 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC087312.1-201ENST00000471411 480 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC090453.1-201ENST00000495560 436 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 HMGB3P13-201ENST00000511263 607 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 Y_RNA.688-201ENST00000516565 95 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 RPL23AP53-201ENST00000521854 457 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 MIR4700-201ENST00000578311 74 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AC073091.2-201ENST00000603205 907 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL163642.2-201ENST00000604722 1019 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL354976.1-201ENST00000613843 387 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL049794.2-201ENST00000616301 365 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 AL031667.3-201ENST00000620124 655 ntBASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A3BPQ9Y5P4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL731532.2-201ENST00000623542 1953 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL356473.1-201ENST00000406203 1408 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-462P-201ENST00000362659 105 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-553P-201ENST00000364047 96 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-878P-201ENST00000384578 110 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 MT-TC-201ENST00000387405 66 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC090960.1-201ENST00000421072 306 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL360081.1-201ENST00000428299 555 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 RPS27AP12-201ENST00000429552 465 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 MTND2P22-201ENST00000444325 1033 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 SYPL1P1-201ENST00000473622 768 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC072039.1-201ENST00000477611 581 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 TMEM251P1-201ENST00000503717 318 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC109458.1-201ENST00000508858 316 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-150P-201ENST00000516237 95 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 TVP23CP2-201ENST00000571473 623 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms