Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC126755.2-208ENST00000327792 462 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC138969.1-213ENST00000331436 462 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 RNU1-18P-201ENST00000363062 164 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 MIR1251-201ENST00000408552 70 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AL159169.1-201ENST00000421119 127 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC016712.1-201ENST00000431088 378 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 MRPL50P1-201ENST00000431951 384 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 BMS1P19-201ENST00000433925 393 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 HMGB1P12-201ENST00000438594 598 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 RN7SL93P-201ENST00000463035 293 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC007537.2-201ENST00000472093 511 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 MIR2114-201ENST00000516645 80 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC069366.1-201ENST00000583159 838 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AL023583.1-201ENST00000607518 1143 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 BX323046.1-201ENST00000610145 535 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC005962.2-201ENST00000611427 652 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC112200.1-201ENST00000625015 234 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 AC092184.1-201ENST00000625042 715 ntBASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
RHBDD3Q9Y3P4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 ASNSP1-204ENST00000641977 1664 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 MTND5P28-201ENST00000438005 1594 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 HMGB3P19-201ENST00000403971 560 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC069218.2-201ENST00000411665 344 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 TPT1P2-201ENST00000413105 503 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 SETP5-201ENST00000437270 562 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 RPL6P5-201ENST00000445678 828 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 RPS17P13-201ENST00000448974 407 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 NF1P3-201ENST00000457709 450 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC010618.1-201ENST00000469924 477 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 RN7SL860P-201ENST00000473738 223 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 RPS4XP13-201ENST00000483219 789 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 IGBP1P5-201ENST00000507524 1000 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC026726.1-201ENST00000512859 601 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 MRPL49P2-201ENST00000521066 465 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 SNRPGP15-201ENST00000600149 222 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC007566.2-201ENST00000603642 413 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 MIR6868-201ENST00000611215 58 ntBASIC3.44□□□□□ -1.86
RHBDD3Q9Y3P4 AC124312.6-202ENST00000623624 418 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms