Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPL38P3-201ENST00000484463 213 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 TOMM22P4-201ENST00000511318 336 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-1334P-201ENST00000516032 105 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SKP147-201ENST00000517154 244 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RANP9-201ENST00000519957 271 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AP000790.1-201ENST00000528891 737 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 NRBF2P1-201ENST00000587407 859 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 APOOP1-201ENST00000604695 592 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AL352984.2-202ENST00000613699 155 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AL359955.1-201ENST00000455242 3275 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SKP162-201ENST00000363605 345 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 Y_RNA.153-201ENST00000363615 91 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNA5SP27-201ENST00000363839 119 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNU105B-201ENST00000364478 208 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-99P-201ENST00000364721 107 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SKP6-201ENST00000364795 319 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-282P-201ENST00000365357 103 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC096644.3-201ENST00000416788 338 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MCFD2P1-201ENST00000417812 300 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC133104.1-201ENST00000429100 218 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC234064.1-201ENST00000436312 247 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AL035666.1-201ENST00000446195 348 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC073909.1-201ENST00000447112 999 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC104058.1-201ENST00000448028 297 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 Y_RNA.635-201ENST00000459041 101 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC108693.1-201ENST00000496068 432 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RPS26P24-201ENST00000497656 331 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MTCO3P44-201ENST00000510977 541 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNY3P15-201ENST00000516297 97 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SKP31-201ENST00000516354 278 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-445P-201ENST00000516949 107 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 RNU2-46P-201ENST00000517038 113 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 APOOP3-201ENST00000536787 586 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AL049779.3-201ENST00000557141 606 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC068790.5-201ENST00000602741 355 ntBASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
PDZRN3Q9UPQ7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 SNORA74A-201ENST00000364089 198 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 HMGB3P31-201ENST00000413333 595 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 HMGB1P11-201ENST00000413899 637 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 SRIP2-201ENST00000428470 166 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 RPL31P35-201ENST00000431058 377 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 HSFY6P-201ENST00000445573 403 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms