Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNU6-31P-201ENST00000384388 108 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 MIR30B-201ENST00000384850 88 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 HMGN2P8-201ENST00000391458 268 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC114814.2-201ENST00000419195 485 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AL445584.1-201ENST00000431451 330 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 RPS24P8-201ENST00000431490 402 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC092809.1-201ENST00000441469 474 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC023512.1-201ENST00000444513 499 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC006480.1-201ENST00000449887 378 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 DNAJC19P1-201ENST00000455312 319 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 RPS20P21-201ENST00000466859 343 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 GAPDHP36-201ENST00000480688 918 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC004069.2-201ENST00000505438 1114 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC108120.2-201ENST00000512973 294 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 RN7SKP141-201ENST00000516167 338 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC022695.1-201ENST00000522089 237 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 SNORA62.6-201ENST00000606322 83 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC019176.2-201ENST00000611579 315 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC005344.1-201ENST00000613391 459 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC244205.2-202ENST00000635781 342 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 OR5AC4P-202ENST00000642086 985 ntBASIC4.53□□□□□ -1.68
CTNNA3Q9UI47 AC025125.1-201ENST00000624743 1922 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AP004289.2-201ENST00000444413 1457 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 RNA5SP119-201ENST00000362715 117 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 RPL30P2-201ENST00000414021 291 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 KRR1P1-201ENST00000419430 803 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 HIGD1AP12-201ENST00000427832 281 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 SNORA71B-202ENST00000439232 272 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 RPS3AP12-201ENST00000443616 753 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 SETD6P1-201ENST00000444575 317 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AL627224.1-201ENST00000448334 444 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 TRBV12-2-201ENST00000489763 344 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC021087.2-201ENST00000504656 1203 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 MTATP6P22-201ENST00000507369 598 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 RAC1P2-201ENST00000511164 579 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 SCARNA14-201ENST00000516903 136 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 RNU6-352P-201ENST00000516908 107 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 IGKV2D-23-201ENST00000518179 286 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 TRMT10BP1-201ENST00000519377 943 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AL161756.2-201ENST00000604597 246 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 AC107905.1-201ENST00000616204 426 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNNA3Q9UI47 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AL031736.2-201ENST00000426573 787 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AL591419.1-201ENST00000427423 339 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 ELOCP6-201ENST00000429066 328 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 ELOCP11-201ENST00000436690 332 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 ELOCP16-201ENST00000444494 332 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 HMGB1P26-201ENST00000452520 628 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 ELOCP12-201ENST00000458706 328 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 SNORD108-201ENST00000459332 71 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 RPL30P11-201ENST00000495304 339 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 HMGB1P21-201ENST00000502313 581 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms