Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 IFNNP1-201ENST00000429219 553 ntBASIC3.32□□□□□ -1.88
CHD7Q9P2D1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC093849.1-201ENST00000563631 2209 ntBASIC3.32□□□□□ -1.88
CHD7Q9P2D1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 MRPL50P2-201ENST00000416821 482 ntBASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC022018.1-201ENST00000430685 241 ntBASIC3.32□□□□□ -1.88
CHD7Q9P2D1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC243829.7-201ENST00000633081 225 ntBASIC3.32□□□□□ -1.88
CHD7Q9P2D1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 DDX18P4-201ENST00000511690 1966 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AL445529.1-201ENST00000398713 389 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AC012065.2-201ENST00000421295 375 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AL513174.1-201ENST00000423182 629 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 OR4C2P-201ENST00000530855 1064 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 MIR7843-201ENST00000622274 79 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 HLFP1-201ENST00000402375 499 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AC073069.1-201ENST00000428657 441 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 ELOCP23-201ENST00000452014 332 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 OR7A8P-201ENST00000595427 913 ntBASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD7Q9P2D1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 SULT1C2P2-201ENST00000562517 294 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC064859.1-201ENST00000624741 174 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 RNU6-283P-201ENST00000364788 107 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 DPPA2P2-201ENST00000418220 897 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 ETF1P3-201ENST00000430422 1160 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 HMGB3P22-202ENST00000451823 572 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AL356321.1-201ENST00000621360 228 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC073325.2-201ENST00000339545 159 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC004552.1-201ENST00000419089 348 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 RPS3P1-201ENST00000456781 192 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AP004607.9-201ENST00000618202 316 ntBASIC3.3□□□□□ -1.88
CHD7Q9P2D1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHD7Q9P2D1 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 RPL37P4-201ENST00000448908 268 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 RN7SL20P-201ENST00000488827 297 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms