Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL354976.1-201ENST00000613843 387 ntBASIC4.63□□□□□ -1.67
LRFN1Q9P244 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.63□□□□□ -1.67
LRFN1Q9P244 AC090116.1-201ENST00000615679 446 ntBASIC4.63□□□□□ -1.67
LRFN1Q9P244 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.63□□□□□ -1.67
LRFN1Q9P244 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.63□□□□□ -1.67
LRFN1Q9P244 THAP12P5-201ENST00000405864 2275 ntBASIC4.63□□□□□ -1.67
LRFN1Q9P244 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.63□□□□□ -1.67
LRFN1Q9P244 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN1Q9P244 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LRFN1Q9P244 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.63□□□□□ -1.67
LRFN1Q9P244 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN1Q9P244 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.63□□□□□ -1.67
LRFN1Q9P244 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN1Q9P244 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LRFN1Q9P244 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN1Q9P244 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN1Q9P244 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 MTCO1P14-201ENST00000441695 1559 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC104623.2-202ENST00000623477 4002 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC021242.1-201ENST00000507315 2035 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC025574.1-201ENST00000554784 1653 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 RNU6-356P-201ENST00000384140 107 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 RNU4-72P-201ENST00000410754 173 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 CTSL3P-202ENST00000412179 788 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL035410.1-201ENST00000427409 427 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 BX323845.1-201ENST00000432417 179 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 RPL23AP33-201ENST00000442301 452 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL590399.6-201ENST00000446396 307 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC012512.1-201ENST00000446594 718 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC004980.3-201ENST00000447046 365 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 TCEA1P1-201ENST00000449716 880 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 PPIAP3-201ENST00000450588 505 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 DDX39BP2-208ENST00000453923 258 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 RPS29P33-201ENST00000456717 146 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 HSPE1P23-201ENST00000509838 286 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC118465.1-201ENST00000513820 1271 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 GCSHP4-201ENST00000538792 439 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 OSBPL9P5-201ENST00000542581 171 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC009117.1-201ENST00000563948 554 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 PRPF19P1-201ENST00000584766 898 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 RPL23AP92-201ENST00000603609 255 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL031320.1-201ENST00000604177 357 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC025588.3-201ENST00000604182 274 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL607023.1-201ENST00000620045 248 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC231657.1-201ENST00000624313 397 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AC009039.2-201ENST00000624524 529 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 AP002907.1-201ENST00000606361 1430 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 AP000542.2-201ENST00000623199 6179 ntBASIC4.62□□□□□ -1.67
LRFN1Q9P244 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LRFN1Q9P244 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN1Q9P244 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 Y_RNA.169-201ENST00000363745 96 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 SNORD116-8-201ENST00000384365 95 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC013442.1-201ENST00000397347 228 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms