Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC126755.2-208ENST00000327792 462 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC138969.1-213ENST00000331436 462 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 RNA5SP391-201ENST00000363456 119 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 MIR7-1-201ENST00000384871 110 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC136624.1-201ENST00000400791 413 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC234782.4-201ENST00000417646 1048 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AL158071.1-201ENST00000430315 461 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC006326.1-201ENST00000445465 787 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 TVP23BP2-201ENST00000455082 615 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 RPL21P103-201ENST00000479921 488 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 RN7SL323P-201ENST00000494712 295 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 ARL2BPP6-201ENST00000512757 439 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC108064.1-201ENST00000513791 460 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AP002812.4-201ENST00000532139 286 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 MIMT1-201ENST00000597105 1050 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC104785.1-201ENST00000603220 588 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AL365503.1-201ENST00000605247 905 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC105429.2-201ENST00000610567 517 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AL732618.1-201ENST00000623251 301 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC119674.1-220ENST00000641502 1048 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 FAM91A3P-201ENST00000456826 2544 ntBASIC3.44□□□□□ -1.86
VAPAQ9P0L0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 PRO1804-201ENST00000623780 2050 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 MIR372-201ENST00000362225 67 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 SNORA70C-201ENST00000384538 135 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AL590290.1-201ENST00000405336 380 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 MTCO3P31-201ENST00000405526 789 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 SDCBPP2-201ENST00000424643 885 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 OR8F1P-201ENST00000425243 930 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 ARL5AP2-201ENST00000444698 533 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 HMGB1P5-202ENST00000451497 985 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 RPS20P32-201ENST00000456044 356 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 RPL37P3-201ENST00000456825 293 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 SNX5P1-201ENST00000505757 1041 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AL121594.4-201ENST00000556211 1196 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC007687.1-201ENST00000602704 304 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AL606490.9-201ENST00000603331 271 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC073111.2-201ENST00000605657 1075 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC092653.1-201ENST00000608509 531 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 MIR6820-201ENST00000611508 62 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 U6.48-201ENST00000618523 106 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.43□□□□□ -1.86
VAPAQ9P0L0 USP8P1-201ENST00000494673 3183 ntBASIC3.43□□□□□ -1.86
VAPAQ9P0L0 AC068647.1-201ENST00000489539 2265 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 NMD3P1-201ENST00000439704 1488 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms