Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 RNU6-283P-201ENST00000364788 107 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 CYB5AP4-201ENST00000396692 399 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 RNU4-6P-201ENST00000410804 122 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AL356276.2-201ENST00000435919 558 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 HMGB3P8-201ENST00000449709 577 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 NPM1P17-201ENST00000479221 602 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 RAC1P2-201ENST00000511164 579 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 RNA5SP208-201ENST00000516156 78 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AC137768.1-201ENST00000549998 553 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 MIR4277-201ENST00000578298 84 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 MIR4425-201ENST00000580572 84 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AL365400.2-201ENST00000605604 902 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 HMGN2P28-201ENST00000606102 262 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 SNORA51-201ENST00000606420 132 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AL592295.2-201ENST00000612578 206 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AP000346.3-201ENST00000622821 210 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AC073530.2-201ENST00000623987 261 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 AL732372.2-225ENST00000642124 456 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.03□□□□□ -1.92
CTNNBIP1Q9NSA3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.03□□□□□ -1.93
CTNNBIP1Q9NSA3 AC073429.2-201ENST00000569694 1444 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 HMGB3P20-201ENST00000417997 600 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AL592293.2-201ENST00000422292 996 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC023512.1-201ENST00000444513 499 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 RPL21P104-201ENST00000464143 478 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 RPS3AP50-201ENST00000487064 803 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC026784.1-201ENST00000507986 352 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 RN7SKP277-201ENST00000516895 283 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 OR5AP1P-201ENST00000529730 940 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AL139174.1-201ENST00000531489 886 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC025260.1-201ENST00000548858 430 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC245128.3-201ENST00000594721 748 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 ARF4P1-201ENST00000605447 541 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 SNORA62.6-201ENST00000606322 83 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC006023.2-201ENST00000609916 167 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AC112200.1-201ENST00000625015 234 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 CDRT1-208ENST00000630868 794 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 AF001550.2-201ENST00000636643 217 ntBASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTNNBIP1Q9NSA3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 RNA5SP130-201ENST00000364431 114 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 RPS26P8-201ENST00000393490 348 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 EIF5P1-201ENST00000400019 1231 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 RN7SKP285-201ENST00000410137 318 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AC105402.1-201ENST00000413336 545 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AC234782.4-201ENST00000417646 1048 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AL390879.2-203ENST00000426943 1121 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 Z74696.2-201ENST00000436514 498 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 HMGN2P20-201ENST00000437531 273 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 ARL5AP3-201ENST00000439327 386 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 NUTF2P3-201ENST00000448540 384 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 AC231760.1-201ENST00000498002 260 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 RPL23AP55-201ENST00000498163 452 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 RN7SKP60-201ENST00000516985 239 ntBASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.01□□□□□ -1.93
CTNNBIP1Q9NSA3 IGKV2-36-201ENST00000519999 223 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms