Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC099785.1-201ENST00000605697 437 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC112503.1-201ENST00000608436 391 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC013468.1-201ENST00000608680 598 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 MIR7151-201ENST00000617477 60 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC022079.2-201ENST00000619739 566 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC009269.6-201ENST00000621778 588 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC018445.2-201ENST00000622987 260 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC010872.1-201ENST00000624225 675 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC126544.2-201ENST00000625174 749 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 CDRT1-208ENST00000630868 794 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL356118.1-201ENST00000635272 1078 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC073055.1-201ENST00000456901 1621 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RNA5SP391-201ENST00000363456 119 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RNU6-932P-201ENST00000391108 106 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL645927.1-201ENST00000396783 406 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC096533.1-201ENST00000411645 353 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 NRBF2P2-201ENST00000413087 861 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RPS6P14-201ENST00000425165 719 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL031736.2-201ENST00000426573 787 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 HIGD1AP4-201ENST00000430194 280 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC011242.1-201ENST00000433596 1158 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 ACTR3P2-201ENST00000439585 1257 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RPL36AP15-201ENST00000444514 266 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC006539.3-201ENST00000454258 129 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RNU7-140P-201ENST00000459546 60 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC007537.2-201ENST00000472093 511 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC004453.1-201ENST00000487895 408 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 OR5D15P-201ENST00000531671 942 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC006518.2-201ENST00000542513 940 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC011477.5-201ENST00000586571 259 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL137849.1-201ENST00000604767 169 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL158050.2-201ENST00000605336 568 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL139022.2-201ENST00000606934 443 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 MIR7155-201ENST00000615925 56 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC006213.4-201ENST00000616184 634 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC007275.1-201ENST00000621243 671 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 MIR7153-201ENST00000637758 57 ntBASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
VIPAS39Q9H9C1 AL158163.1-201ENST00000603915 1649 ntBASIC3.99□□□□□ -1.77
VIPAS39Q9H9C1 MTND4P9-201ENST00000507819 1346 ntBASIC3.99□□□□□ -1.77
VIPAS39Q9H9C1 OR56B2P-202ENST00000641377 2453 ntBASIC3.99□□□□□ -1.77
VIPAS39Q9H9C1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VIPAS39Q9H9C1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms