Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL356057.1-202ENST00000402263 756 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 RN7SKP56-201ENST00000410513 331 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 FAM204CP-201ENST00000424489 642 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL390879.2-203ENST00000426943 1121 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 HIGD1AP12-201ENST00000427832 281 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC006480.1-201ENST00000449887 378 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC026402.1-201ENST00000513642 170 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 RN7SKP209-201ENST00000516888 304 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 RFPL1S-203ENST00000539579 330 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC025918.2-201ENST00000558683 763 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL020997.2-201ENST00000602607 184 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AC040174.2-201ENST00000602701 465 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL392112.1-201ENST00000605115 829 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AL354760.1-201ENST00000608357 643 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 RNU1-18P-201ENST00000363062 164 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 RPL17P36-201ENST00000420302 549 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC105402.2-201ENST00000438503 358 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 MTCYBP21-201ENST00000443300 1113 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AL133477.1-201ENST00000457472 514 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 RN7SL323P-201ENST00000494712 295 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC005798.1-201ENST00000513715 387 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 CIR1P1-201ENST00000524055 1133 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 CYCSP30-201ENST00000546447 172 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AL133457.1-201ENST00000564251 987 ntBASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCSER1Q9C0I3 AC138393.1-206ENST00000540997 1886 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL589826.1-201ENST00000340697 249 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 SOD2P1-201ENST00000396543 562 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 RPL32P23-201ENST00000397237 405 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 HSPE1P8-201ENST00000406997 288 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 RPL36AP36-201ENST00000418616 301 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 FAR1P1-201ENST00000427163 934 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 RPS27P5-201ENST00000444247 244 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC069540.1-201ENST00000446320 988 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL359073.1-201ENST00000448036 403 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 UBDP1-202ENST00000457888 382 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC096992.1-201ENST00000459808 709 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 NPM1P17-201ENST00000479221 602 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 NPM1P41-201ENST00000512920 831 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms