Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 OR13C1P-202ENST00000641378 2919 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 LINC00622-201ENST00000562811 1570 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 OR11H5P-202ENST00000641612 1325 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 SNORA69-201ENST00000383895 132 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RNU11-201ENST00000387069 134 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 MRPL42P2-201ENST00000403169 426 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 MTATP6P18-201ENST00000417994 673 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 COX6CP17-201ENST00000421389 185 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL590399.2-201ENST00000427536 309 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RPS12P17-201ENST00000438591 377 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 CACYBPP1-201ENST00000438592 684 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RPL5P25-201ENST00000441148 775 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 YWHAEP1-201ENST00000453697 763 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 BTF3P5-201ENST00000457252 467 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RNU6-835P-201ENST00000516974 104 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 SCARNA6.1-201ENST00000516989 238 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RNU6-1003P-201ENST00000517099 105 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC009117.1-201ENST00000563948 554 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 MIR4433B-201ENST00000581329 102 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC011445.2-201ENST00000599274 173 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL360012.1-201ENST00000602813 131 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AL713922.2-201ENST00000619384 716 ntBASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP3Q9BWW4 AC232271.1-201ENST00000602455 2715 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 Y_RNA.387-201ENST00000383918 102 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms