Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GYG1P1-201ENST00000460864 698 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 NENFP3-201ENST00000503735 313 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 SAP18P1-201ENST00000512058 390 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC027544.3-201ENST00000535082 757 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 CCNG2P1-201ENST00000549521 1000 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 KC877982.1-201ENST00000602313 470 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC004908.2-201ENST00000609090 574 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC091953.2-201ENST00000623979 160 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AL157786.1-207ENST00000627771 695 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC000374.1-201ENST00000434698 1745 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRAIPQ9BWF2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRAIPQ9BWF2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 SNORA20.2-201ENST00000383922 131 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC005522.1-201ENST00000395416 346 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 RNU2-62P-201ENST00000410868 191 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 ELOCP4-201ENST00000420090 333 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC099677.3-201ENST00000427081 395 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AL121776.1-201ENST00000429337 372 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC104850.1-201ENST00000435940 476 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 Z99127.3-201ENST00000448158 395 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC079448.1-201ENST00000449377 373 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 SDC4P-201ENST00000453285 601 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC114967.1-201ENST00000504890 259 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 IGKV2-19-201ENST00000518132 283 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC103783.1-201ENST00000520506 373 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AP001893.2-201ENST00000526949 202 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 CR383656.7-201ENST00000548164 174 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 HAUS8P1-201ENST00000549005 542 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 MIR3118-1-201ENST00000581787 76 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 OR6R2P-201ENST00000609216 300 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC093671.1-201ENST00000624981 2929 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC010266.2-201ENST00000564741 3255 ntBASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRAIPQ9BWF2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 THAP12P4-201ENST00000528321 2266 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 Y_RNA.1-201ENST00000352915 104 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RNA5SP242-201ENST00000364171 118 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 Y_RNA.248-201ENST00000364501 109 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RNA5SP211-201ENST00000365516 117 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RN7SKP229-201ENST00000410465 302 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 BMS1P17-202ENST00000416720 316 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RPS4XP5-201ENST00000419038 768 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 OR2AH1P-201ENST00000425717 928 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms