Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC138393.1-206ENST00000540997 1886 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 Y_RNA.453-201ENST00000384223 109 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-1009P-201ENST00000390996 107 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-780P-201ENST00000391030 104 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 RPL26P37-201ENST00000411983 438 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 RPL12P3-201ENST00000440080 396 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 MTCO3P18-201ENST00000440206 761 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC093270.2-201ENST00000486157 792 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 MTND3P22-201ENST00000510932 243 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 Y_RNA.701-201ENST00000516812 110 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC022884.2-201ENST00000578535 580 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 BPTFP1-201ENST00000579209 492 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 DUXAP4-201ENST00000603046 613 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC105254.2-201ENST00000603636 436 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC018695.5-201ENST00000605872 315 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC090510.2-201ENST00000617465 629 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AL121890.2-201ENST00000617644 465 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC010338.1-201ENST00000621823 717 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC024614.3-201ENST00000637860 256 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-1090P-201ENST00000364065 94 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-692P-201ENST00000384496 107 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AL109941.1-201ENST00000401925 229 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 HMGB3P18-201ENST00000406327 590 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 PIGPP2-201ENST00000411569 458 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 HMGB3P31-201ENST00000413333 595 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 PRPF38AP2-201ENST00000438179 851 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AL022238.1-201ENST00000442557 355 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC005002.1-201ENST00000447458 540 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 MTND1P18-201ENST00000448191 573 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC098824.1-201ENST00000453565 980 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 HIGD1AP8-201ENST00000453927 274 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 HSPE1P22-201ENST00000456856 327 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC108161.1-201ENST00000461060 402 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 RPL30P9-201ENST00000465586 330 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 RPS3AP17-201ENST00000472594 777 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 RPS4XP15-201ENST00000489210 795 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC140172.1-201ENST00000502928 141 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC010350.1-201ENST00000504908 231 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC022483.1-201ENST00000514020 567 ntBASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms