Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 SOD1P3-201ENST00000518682 454 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC022695.1-201ENST00000522089 237 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 PTP4A1P6-201ENST00000531034 478 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC009643.1-201ENST00000532030 391 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC137768.1-201ENST00000549998 553 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 OR4T1P-201ENST00000554933 911 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 OR4H12P-201ENST00000556269 907 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC018754.1-201ENST00000607486 925 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC004832.5-201ENST00000608677 401 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AP000553.6-201ENST00000641242 118 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC080100.1-201ENST00000624239 5356 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 RNU4-39P-201ENST00000362455 127 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 RNA5SP295-201ENST00000362655 121 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 RNA5SP130-201ENST00000364431 114 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 SNORA62-201ENST00000365493 153 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 OR6C69P-201ENST00000394268 893 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC240504.1-201ENST00000395709 845 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AL445189.1-201ENST00000405722 338 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC004987.3-201ENST00000413879 771 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC007394.1-201ENST00000421941 531 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC012498.1-201ENST00000424037 437 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 OSTCP5-201ENST00000425293 453 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC068287.1-201ENST00000430283 295 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 OR2B8P-201ENST00000432841 938 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC244505.4-201ENST00000434905 287 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 CBX1P4-201ENST00000439415 457 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 SSXP5-201ENST00000443473 287 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 HMGN1P18-201ENST00000457642 277 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC091179.1-201ENST00000461606 579 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC021205.1-201ENST00000468797 348 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 RPL7P5-201ENST00000471472 736 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC020893.1-201ENST00000502452 580 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 OR7E13P-201ENST00000526052 910 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 OR4A2P-201ENST00000527276 913 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC120057.2-201ENST00000571520 271 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 MIR4277-201ENST00000578298 84 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 MIR3690-201ENST00000580266 75 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AL606490.9-201ENST00000603331 271 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 SNORA62.6-201ENST00000606322 83 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC112503.1-201ENST00000608436 391 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AP000346.3-201ENST00000622821 210 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 AC090506.2-201ENST00000624521 419 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 API5P2-201ENST00000397055 1498 ntBASIC2.68□□□□□ -1.98
AP1S3Q96PC3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.68□□□□□ -1.98
AP1S3Q96PC3 MTND5P7-201ENST00000413558 1798 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC012618.3-205ENST00000637896 1496 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC058791.1-201ENST00000608412 3198 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 SNORA51.4-201ENST00000364993 124 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms