Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC093519.1-201ENST00000566109 298 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 ISCA1P3-201ENST00000577104 373 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC008687.2-201ENST00000597865 520 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC233280.2-201ENST00000603917 1070 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC124312.4-201ENST00000605533 310 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL451064.1-201ENST00000607718 471 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC072039.2-201ENST00000608883 439 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC122133.1-201ENST00000613964 233 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC243756.2-201ENST00000618406 463 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 MIR6853-201ENST00000619642 74 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC091931.1-201ENST00000623488 728 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC007529.1-201ENST00000418574 2178 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 OR10J6P-201ENST00000289731 930 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-931P-201ENST00000363850 107 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-115P-201ENST00000364310 107 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 SUGT1P1-201ENST00000379514 476 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 FCF1P2-201ENST00000415284 583 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 BX119904.4-201ENST00000424402 301 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 BRWD1P3-201ENST00000428816 390 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 TDGF1P1-201ENST00000445734 527 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC092324.1-201ENST00000468671 324 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 SYPL1P1-201ENST00000473622 768 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 XKRY-201ENST00000510392 1100 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 HNRNPKP5-201ENST00000515300 253 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 OR5AN2P-201ENST00000534535 896 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 SERPINE4P-201ENST00000554978 281 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC079075.1-201ENST00000559543 878 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 HNRNPCP4-201ENST00000571636 900 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC017100.2-201ENST00000584628 355 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 DUXAP11-201ENST00000603858 526 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 COX6CP4-201ENST00000605798 228 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 MKKS-204ENST00000639674 192 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC006971.1-201ENST00000407916 4486 ntBASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP3Q96JB5 AC107982.1-201ENST00000507171 1300 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 AL590240.1-201ENST00000334118 313 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 RNA5SP391-201ENST00000363456 119 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 RN7SKP103-201ENST00000363848 320 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-553P-201ENST00000364047 96 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-621P-201ENST00000364752 109 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 SNORA71.2-201ENST00000364941 134 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 PRRC2CP1-201ENST00000404428 159 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 AC004022.2-201ENST00000413824 193 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 AC140479.3-201ENST00000418944 1126 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 AL022400.1-201ENST00000423946 935 ntBASIC5.24□□□□□ -1.57
CDK5RAP3Q96JB5 RPL31P54-201ENST00000429803 370 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms