Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC004217.3-201ENST00000551552 878 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MIR4789-201ENST00000577469 82 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MIR5096-201ENST00000583713 70 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC068620.3-201ENST00000602749 560 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC112230.1-201ENST00000604342 547 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AP004247.3-201ENST00000608682 624 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC018926.1-201ENST00000616335 435 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AL445984.1-201ENST00000637834 659 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 IQCB2P-201ENST00000401788 1633 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP502-201ENST00000362694 119 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 SNORA72.3-201ENST00000365074 132 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 MIR122-201ENST00000385044 85 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RNU6-1000P-201ENST00000391066 106 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC115285.1-201ENST00000424879 736 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC096632.1-201ENST00000427395 310 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 MTCYBP32-201ENST00000427945 1084 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AL645638.1-201ENST00000440519 361 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AL096829.2-201ENST00000446582 742 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 OR51B8P-201ENST00000449892 769 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RPS20P32-201ENST00000456044 356 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RPS15AP1-201ENST00000457423 391 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP246-201ENST00000458909 119 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC091959.2-201ENST00000477363 321 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RPS26P15-201ENST00000488067 348 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC013356.1-201ENST00000489027 564 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RPS6P4-201ENST00000494693 758 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC023141.12-201ENST00000512399 199 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RNU6-416P-201ENST00000516265 103 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP519-201ENST00000516480 119 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC007424.1-203ENST00000554613 687 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC105227.2-201ENST00000615075 605 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC010608.3-201ENST00000625048 527 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC138649.5-201ENST00000637456 137 ntBASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM5Q96HC4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP513-201ENST00000364648 118 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RNU6-549P-201ENST00000384433 107 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RN7SKP182-201ENST00000410772 298 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC011933.1-201ENST00000413334 321 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 OR51A3P-201ENST00000413596 924 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RPS3AP9-201ENST00000417027 792 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 MTCYBP24-201ENST00000420387 1106 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 COX6CP15-201ENST00000426313 211 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RPS27AP12-201ENST00000429552 465 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC068287.1-201ENST00000430283 295 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 ELOCP18-201ENST00000434209 337 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 GSTA7P-201ENST00000438425 448 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms