Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 RN7SKP21-201ENST00000516503 220 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 RNU6-1004P-201ENST00000516584 111 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 MYL12AP1-201ENST00000518490 515 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 PDCL2P2-201ENST00000533651 189 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTP4Q96DX8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 CYP2C60P-201ENST00000566088 139 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 MTCO1P40-201ENST00000574371 625 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC113403.1-201ENST00000604910 193 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC090948.1-201ENST00000607464 549 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC064801.1-201ENST00000612025 407 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC009237.17-201ENST00000618111 748 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 VN1R7P-201ENST00000619242 903 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC007490.1-201ENST00000624321 703 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC011944.2-201ENST00000624440 683 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC092608.3-201ENST00000625017 386 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 AC008013.2-202ENST00000637965 364 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 AL606537.1-201ENST00000607258 2011 ntBASIC4.39□□□□□ -1.71
RTP4Q96DX8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTP4Q96DX8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTP4Q96DX8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.39□□□□□ -1.71
RTP4Q96DX8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTP4Q96DX8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC021755.1-201ENST00000559747 1447 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 FAM133CP-201ENST00000332869 704 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 MIR331-201ENST00000362302 94 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RHOT1P2-201ENST00000366423 333 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 ATP5F1P3-201ENST00000397213 657 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL583835.1-201ENST00000399570 407 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RPS27AP11-201ENST00000402798 447 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC013404.1-201ENST00000413068 249 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL157831.1-201ENST00000426134 473 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AP000936.3-201ENST00000438127 255 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 UBE2D3P4-201ENST00000441973 436 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC118469.1-201ENST00000442943 488 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL035551.1-201ENST00000446931 348 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC005002.1-201ENST00000447458 540 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 MTND1P29-201ENST00000448112 647 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 NPM1P13-201ENST00000452663 865 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RPS27AP8-201ENST00000452665 445 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RPL23AP81-201ENST00000455252 467 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RNU7-125P-201ENST00000458760 62 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RN7SL585P-201ENST00000470538 280 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RAP1BP2-201ENST00000478270 544 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 RPS3AP43-201ENST00000479743 781 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC025445.1-201ENST00000502728 300 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC008565.1-201ENST00000509046 885 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 MTCYBP16-201ENST00000509187 1129 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 MTND4LP31-201ENST00000514859 294 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 FABP5P12-201ENST00000515543 389 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 MTCO1P49-201ENST00000523429 802 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC090819.1-201ENST00000523800 1111 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AP003033.1-201ENST00000527244 415 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AP003461.1-201ENST00000528866 78 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC090425.2-201ENST00000608818 501 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 VIS1.1-201ENST00000610517 203 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms