Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 MTCO1P48-201ENST00000448024 1096 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 HIGD1AP8-201ENST00000453927 274 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 MTCYBP17-201ENST00000503579 789 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 GAPDHP56-201ENST00000506031 988 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 KRT19P6-201ENST00000510983 209 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC026412.2-201ENST00000512270 1075 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 DEFB131D-201ENST00000526803 184 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC087276.1-201ENST00000529659 480 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC090515.3-201ENST00000560431 315 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC233702.9-201ENST00000581528 203 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AP001521.1-201ENST00000609150 300 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL121873.1-201ENST00000616013 524 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC015914.2-201ENST00000618167 288 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC018816.2-201ENST00000621460 353 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC019206.1-201ENST00000621938 425 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 OR5BE1P-202ENST00000641168 1176 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 SMG1P6-201ENST00000532337 2930 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AP000756.2-201ENST00000624168 2567 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 CYP1D1P-201ENST00000416662 1433 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 XPOTP1-201ENST00000443317 2398 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC135352.1-201ENST00000506173 1418 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 SNRPEP3-201ENST00000338402 276 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RNU1-85P-201ENST00000364127 164 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RNU6-723P-201ENST00000383973 107 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 SNORA51.8-201ENST00000384234 132 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 Y_RNA.517-201ENST00000384551 106 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 ATG4AP1-201ENST00000416893 538 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC092647.1-201ENST00000420654 287 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RPS24P1-201ENST00000438550 371 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL645937.3-201ENST00000453647 936 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 DNAJC19P1-201ENST00000455312 319 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RPL30P9-201ENST00000465586 330 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RPL7AP10-201ENST00000481016 791 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AP001922.4-201ENST00000526967 290 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 PSMB7P1-201ENST00000556349 514 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 KPNA2P3-201ENST00000584190 848 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC107982.3-201ENST00000584957 985 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC243773.3-201ENST00000613270 256 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AL356596.1-201ENST00000624230 379 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 AC009229.4-201ENST00000623854 1947 ntBASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTHRC1Q96CG8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms