Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 RNU6-276P-201ENST00000516114 96 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AP001317.1-201ENST00000531194 960 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 UBE2FP2-201ENST00000566646 462 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC016180.1-201ENST00000567945 403 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC005412.1-201ENST00000580812 1049 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC068790.7-201ENST00000602347 528 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 MIR6891-201ENST00000618788 93 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC068870.2-201ENST00000620635 389 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC009269.6-201ENST00000621778 588 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC019278.1-201ENST00000623516 479 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC099654.8-201ENST00000637757 681 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC125257.1-201ENST00000560400 2930 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 RNU1-130P-201ENST00000363930 160 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 RNU4-51P-201ENST00000364206 140 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 SNORD66.1-201ENST00000391230 76 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 SPTLC1P2-201ENST00000407089 121 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AL133384.1-201ENST00000412744 351 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 CYP4F29P-201ENST00000420685 446 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 DPRXP1-201ENST00000426312 460 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 FTH1P6-201ENST00000430768 320 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 RPL23AP16-201ENST00000441715 421 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AL358794.1-201ENST00000445689 381 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 HMGB1P16-201ENST00000447155 540 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AL034418.1-201ENST00000448675 860 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 MTCO3P2-201ENST00000457365 171 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AL133477.1-201ENST00000457472 514 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC069528.1-202ENST00000482888 637 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC078817.1-201ENST00000492623 435 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC093752.1-206ENST00000511823 336 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 OR7H2P-201ENST00000513483 306 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 ZNF705CP-201ENST00000530515 889 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC090616.5-202ENST00000582111 297 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 SNORD39.3-201ENST00000584451 71 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 GAS5-AS1-201ENST00000602767 694 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AL513477.2-201ENST00000607858 568 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AL391834.2-201ENST00000609982 546 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 AC018445.2-201ENST00000622987 260 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 OR1S1-201ENST00000624470 978 ntBASIC4.18□□□□□ -1.74
VPS33AQ96AX1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS33AQ96AX1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 ZNF962P-201ENST00000443465 3140 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms