Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIR6875-201ENST00000617506 72 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL356490.1-201ENST00000623079 479 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 HPVC1-201ENST00000629899 1198 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC073073.2-201ENST00000609827 2578 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AL353692.2-201ENST00000407054 335 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AL357078.2-201ENST00000416486 427 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AC091390.1-201ENST00000433904 331 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 Z74696.2-201ENST00000436514 498 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 MTND5P8-201ENST00000449817 1083 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 RPS3AP50-201ENST00000487064 803 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 RN7SKP60-201ENST00000516985 239 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AL139174.1-201ENST00000531489 886 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AL121766.1-201ENST00000547436 487 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 CKS1BP1-201ENST00000555221 240 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AC053481.4-201ENST00000583164 216 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AL049634.3-201ENST00000604968 457 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 SPATA2P1-201ENST00000431223 2055 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.1□□□□□ -1.91
RTN4IP1Q8WWV3 AC100871.1-201ENST00000507871 1456 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 U1.1-201ENST00000384101 164 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RNU6-883P-201ENST00000384597 107 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RNA5SP424-201ENST00000390988 115 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 HMGB3P20-201ENST00000417997 600 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 MTND4P24-201ENST00000424002 397 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 FAM204CP-201ENST00000424489 642 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RNU7-27P-201ENST00000459281 62 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 VN1R105P-201ENST00000486595 910 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RN7SL323P-201ENST00000494712 295 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RPL7P47-201ENST00000497299 556 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC023050.1-201ENST00000498198 304 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 PCBP2P3-201ENST00000509726 843 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC022695.1-201ENST00000522089 237 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 CYCSP30-201ENST00000546447 172 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 SS18L2P2-201ENST00000583960 235 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 RMST_8.1-201ENST00000610287 165 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 AC025016.1-201ENST00000616746 682 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms