Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC104837.2-201ENST00000427236 424 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 RPS24P8-201ENST00000431490 402 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC006011.1-201ENST00000442758 349 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 RN7SL860P-201ENST00000473738 223 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC087879.1-201ENST00000474343 374 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AF213884.1-201ENST00000488102 463 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AP000563.1-201ENST00000490865 758 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 RPL7P24-201ENST00000493052 752 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AL024509.2-201ENST00000493462 493 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 FCF1P3-201ENST00000496394 590 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 RPL21P131-201ENST00000497298 483 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 RN7SL612P-201ENST00000497704 295 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC108941.1-201ENST00000502853 530 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 RNU6-1073P-201ENST00000517182 106 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 CASP1P2-201ENST00000526830 1258 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC006960.3-201ENST00000561845 705 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AP005901.4-201ENST00000577336 569 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC115085.1-201ENST00000588924 229 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC005084.1-201ENST00000605160 304 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AL356218.2-201ENST00000605264 187 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC005899.6-201ENST00000620729 297 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AP002799.1-201ENST00000623552 423 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 MIR4496-201ENST00000635896 61 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC090897.3-201ENST00000636973 1157 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 LRRC77P-213ENST00000637727 880 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 OR56B2P-202ENST00000641377 2453 ntBASIC1.94□□□□□ -2.1
SPTSSBQ8NFR3 AC091564.4-201ENST00000533934 2194 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AL136520.1-201ENST00000600311 1322 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC233263.6-201ENST00000631132 1963 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 MIR323A-201ENST00000362199 86 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP97-201ENST00000365006 84 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP36-201ENST00000410197 133 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RN7SKP182-201ENST00000410772 298 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP31-201ENST00000411144 127 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC108032.1-201ENST00000416706 207 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 HMGB3P20-201ENST00000417997 600 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 XKRYP6-201ENST00000440468 1116 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 XKRYP3-201ENST00000442113 1116 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 Z96811.1-201ENST00000445880 108 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 Z95152.1-201ENST00000453556 656 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC104472.2-201ENST00000469035 601 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RPL35P6-201ENST00000490024 372 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 F11-205ENST00000492972 1204 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 APOOP4-201ENST00000513530 597 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RN7SKP277-201ENST00000516895 283 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 TRMT10BP1-201ENST00000519377 943 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 CIR1P1-201ENST00000524055 1133 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 GCSHP4-201ENST00000538792 439 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC055876.1-202ENST00000567053 138 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms