Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 RPS17P5-201ENST00000498293 408 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC019235.1-201ENST00000503847 207 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 EIF3KP3-201ENST00000514461 639 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 Y_RNA.704-201ENST00000516851 102 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 SNORA20.3-201ENST00000516880 132 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 FAM92A1P1-201ENST00000528023 890 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AP000790.1-201ENST00000528891 737 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC005341.1-201ENST00000571086 708 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AL391840.1-201ENST00000571144 367 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC013244.1-201ENST00000604279 193 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC008945.2-201ENST00000606056 604 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AL590282.1-201ENST00000610379 1136 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MLECP1-201ENST00000615893 709 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MTND4P12-201ENST00000498999 1377 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 LINC00561-201ENST00000565815 2738 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 MIR133B-201ENST00000362210 119 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 Y_RNA.402-201ENST00000383972 102 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 MT-TL1-201ENST00000386347 75 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 HSPA8P15-201ENST00000401676 786 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 SLC35E1P1-201ENST00000419313 864 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 BX510359.3-201ENST00000422168 306 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 SRSF1P1-201ENST00000424058 520 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AL445669.1-201ENST00000426743 755 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 RABEPKP1-201ENST00000440529 1026 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC106872.3-201ENST00000495104 446 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 ARL4AP2-201ENST00000507378 601 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 HIGD1AP14-201ENST00000507617 282 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC046134.1-201ENST00000514454 666 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AL389895.1-201ENST00000554127 252 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 VN1R84P-201ENST00000593697 235 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AL451049.1-201ENST00000608672 497 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AC009237.17-201ENST00000618111 748 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AP003400.5-201ENST00000624827 617 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 USP9YP4-201ENST00000424401 1745 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 ABCC13-202ENST00000463099 3842 ntBASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM48Q8IWZ4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC017104.4-201ENST00000636283 1592 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms