Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RPL23AP32-201ENST00000395315 459 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL049697.2-201ENST00000403708 294 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 CCNG1P1-201ENST00000406783 885 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC127391.1-201ENST00000411737 98 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC116036.1-201ENST00000412199 367 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL589872.1-201ENST00000426602 288 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RPL12P17-201ENST00000432393 498 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RN7SL51P-201ENST00000468230 285 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC023598.1-201ENST00000472521 361 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RPL35P6-201ENST00000490024 372 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC024558.1-201ENST00000505008 528 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC093853.1-201ENST00000515689 483 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 OR5AQ1P-201ENST00000527596 927 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC025588.3-201ENST00000604182 274 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC007363.1-201ENST00000604736 620 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL009028.1-201ENST00000604895 802 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AL133173.2-201ENST00000614270 90 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC118658.2-201ENST00000618697 459 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC025470.1-201ENST00000510053 2032 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC131971.1-201ENST00000332881 1482 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC024560.2-201ENST00000507981 1497 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 NUP58P1-201ENST00000502546 1738 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL161756.3-201ENST00000641216 2071 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 RNY4P14-201ENST00000363656 96 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 RNU6-1103P-201ENST00000384150 107 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL049693.1-201ENST00000402760 611 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL356057.2-201ENST00000403318 432 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 RNU6-195P-201ENST00000411352 109 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 RPS17P17-201ENST00000419392 409 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC069157.1-201ENST00000421749 137 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 RPL30P3-201ENST00000424262 333 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 UBE2V1P13-201ENST00000436983 439 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 RN7SL172P-201ENST00000460535 303 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AP001992.1-205ENST00000462248 379 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 HIGD1AP14-201ENST00000507617 282 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC009646.1-201ENST00000510455 318 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 MTND3P22-201ENST00000510932 243 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC123904.3-201ENST00000547218 814 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AL049634.3-201ENST00000604968 457 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC008277.2-201ENST00000605196 797 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 MIR98-201ENST00000606724 119 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 PART1_1.1-201ENST00000611761 217 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 MIR7155-201ENST00000615925 56 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC132068.1-201ENST00000623805 459 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms