Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNA5SP438-201ENST00000516561 112 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 IGKV2-18-201ENST00000522607 343 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL358913.1-201ENST00000554342 121 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC106785.4-201ENST00000569492 412 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC053481.3-201ENST00000577881 843 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC006270.2-201ENST00000578523 652 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC105224.1-201ENST00000587055 421 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 POLR3GP2-201ENST00000588366 668 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC067852.5-201ENST00000589299 310 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC020916.2-201ENST00000591242 360 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC073046.2-201ENST00000604756 527 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 RNA5SP440-201ENST00000612665 119 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC245014.3-201ENST00000618589 347 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 CYP3A51P-201ENST00000633513 256 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 SNX18P3-202ENST00000565670 1750 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 HSPA8P14-201ENST00000552265 1805 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 PROS2P-201ENST00000474651 1951 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 XPOTP1-201ENST00000443317 2398 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 Y_RNA.367-201ENST00000365544 101 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 RN7SKP235-201ENST00000410662 305 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 RN7SKP293-201ENST00000411389 296 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 CBX3P6-201ENST00000430257 527 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 CECR9-201ENST00000453421 199 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 MTND1P9-201ENST00000453775 944 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 SNX18P26-201ENST00000458433 740 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 RNU6-1218P-201ENST00000458990 108 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AF213884.1-201ENST00000488102 463 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 MTCO1P29-201ENST00000496868 288 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 KHDC1P1-201ENST00000511053 508 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC104136.1-201ENST00000512969 394 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 Y_RNA.718-201ENST00000517110 102 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 NARSP2-201ENST00000518524 679 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 SUMO2P20-201ENST00000520803 283 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 NCAPGP2-201ENST00000557911 754 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 GLUD1P4-201ENST00000590914 418 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC068790.3-201ENST00000602988 553 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AL080274.1-201ENST00000605565 220 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC084781.2-201ENST00000615568 161 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 AC000123.2-201ENST00000623124 461 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 MTND4LP32-201ENST00000636111 270 ntBASIC6.65□□□□□ -1.34
RNF135Q8IUD6 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF135Q8IUD6 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RNF135Q8IUD6 AL022323.4-201ENST00000623980 13120 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 AC025809.2-201ENST00000625085 1802 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 PWAR1-201ENST00000624188 2414 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.445-201ENST00000384168 102 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 RNU6-1207P-201ENST00000384343 107 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 SNORD116-29-201ENST00000384516 83 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 RNU4-70P-201ENST00000384579 139 ntBASIC6.64□□□□□ -1.35
RNF135Q8IUD6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms