Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 AC074051.3-201ENST00000570238 358 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AC010928.3-201ENST00000587712 541 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 OR4G1P-201ENST00000588632 938 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AC068790.5-201ENST00000602741 355 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AL020997.3-201ENST00000602843 359 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AC019193.2-201ENST00000610012 634 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AC018926.1-201ENST00000616335 435 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 MIR4727-201ENST00000622232 55 ntBASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
WDR88Q6ZMY6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL359893.1-201ENST00000447628 1580 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 MAPK10-373ENST00000641983 6772 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL355578.1-201ENST00000607405 1328 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC007685.1-201ENST00000329806 452 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 SNORA63.3-201ENST00000362682 132 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RNU6-353P-201ENST00000364266 108 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TMSB4XP8-201ENST00000402089 135 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TMSB4XP6-201ENST00000415187 135 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TMSB4XP1-201ENST00000424567 135 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 COX6CP15-201ENST00000426313 211 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC011998.1-201ENST00000433403 117 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RPS3AP54-201ENST00000435535 734 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC000041.1-201ENST00000439655 175 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RAD23BP3-201ENST00000454157 1152 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RPS20P32-201ENST00000456044 356 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RPL7P32-201ENST00000457119 744 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC005921.1-201ENST00000510589 286 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 MTCO1P30-201ENST00000515244 580 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RNA5SP49-201ENST00000516450 115 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 RNA5SP309-201ENST00000516670 106 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AP003355.1-201ENST00000518956 587 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC006518.2-201ENST00000542513 940 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC063950.1-201ENST00000552036 308 ntBASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
WDR88Q6ZMY6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 AL157700.1-201ENST00000561973 1432 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 AC008725.1-201ENST00000605123 2263 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 RNU6-1226P-201ENST00000384317 107 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 SNORA40.4-201ENST00000390971 128 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 RPS4XP9-201ENST00000405151 780 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 MTCO3P31-201ENST00000405526 789 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 AL355615.1-201ENST00000406187 641 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 RPL7P53-201ENST00000421245 739 ntBASIC3.81□□□□□ -1.8
WDR88Q6ZMY6 AC009237.2-201ENST00000421358 284 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms