Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL139276.1-201ENST00000311910 1001 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 BX323014.1-201ENST00000412876 237 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 COX6CP15-201ENST00000426313 211 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 PSMA6P3-201ENST00000428242 164 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AF228730.2-201ENST00000438784 848 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 RPL23AP43-201ENST00000446445 471 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC087879.1-201ENST00000474343 374 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 RN7SL604P-201ENST00000492589 296 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 RNU2-10P-201ENST00000516375 211 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL365434.2-201ENST00000607979 234 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AL049794.2-201ENST00000616301 365 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 MIR6837-201ENST00000620884 64 ntBASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PRPF38BQ5VTL8 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 Y_RNA.176-201ENST00000363815 109 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 RNU6-1222P-201ENST00000384615 107 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC005042.1-201ENST00000393397 800 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 RN7SKP281-201ENST00000410472 352 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 RNU6-847P-201ENST00000411115 108 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 RNU4-61P-201ENST00000411243 107 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC245028.1-201ENST00000423259 256 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 C4BPAP2-201ENST00000428434 478 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL162395.1-201ENST00000457882 422 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AP001992.1-205ENST00000462248 379 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL136126.1-201ENST00000473603 402 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC100784.1-201ENST00000522790 310 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 COX6CP3-201ENST00000580869 223 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL513327.3-201ENST00000602618 469 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL670379.11-201ENST00000604059 253 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL670379.10-201ENST00000604330 253 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL670379.12-201ENST00000605291 253 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL670379.9-201ENST00000605428 253 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC133644.2-201ENST00000608142 540 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 Z82243.1-201ENST00000609432 473 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms