Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 Y_RNA.259-201ENST00000364619 101 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 RNU6-996P-201ENST00000365438 107 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 RN7SKP187-201ENST00000365536 330 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PCDH1Q08174 MIR559-201ENST00000385188 96 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 DSTNP4-201ENST00000399472 474 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AC127526.1-201ENST00000417526 366 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AL645937.1-202ENST00000421799 937 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 RPL12P12-201ENST00000424633 501 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 DUTP6-201ENST00000425573 462 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AL356276.2-201ENST00000435919 558 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDH1Q08174 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDH1Q08174 DDX3P2-201ENST00000446138 111 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH1Q08174 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 snoU13.29-201ENST00000459370 104 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH1Q08174 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH1Q08174 RPS4XP14-201ENST00000493072 781 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AL117692.1-201ENST00000494283 713 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AC113367.2-201ENST00000505749 160 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDH1Q08174 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 AC093677.1-201ENST00000514414 678 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 RNA5SP337-201ENST00000517007 109 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDH1Q08174 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 BNIP3P6-201ENST00000549284 499 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AC107958.1-201ENST00000556576 290 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDH1Q08174 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDH1Q08174 MIR132-201ENST00000591554 101 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 uc_338.29-201ENST00000615099 168 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AC010205.1-201ENST00000616668 449 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDH1Q08174 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDH1Q08174 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDH1Q08174 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.84□□□□□ -1.48
PCDH1Q08174 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDH1Q08174 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDH1Q08174 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDH1Q08174 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.84□□□□□ -1.48
PCDH1Q08174 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
PCDH1Q08174 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.84□□□□□ -1.48
PCDH1Q08174 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
PCDH1Q08174 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 RBPJP7-201ENST00000442803 1447 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 RBPJP5-201ENST00000449433 1447 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 AL442128.2-201ENST00000620246 1824 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 NLRP3P1-201ENST00000622303 1785 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PCDH1Q08174 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 Y_RNA.579-201ENST00000390939 94 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 RPL7P60-201ENST00000397636 735 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 AL356421.1-201ENST00000403255 413 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 RN7SKP86-201ENST00000410454 332 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 RPL36AP36-201ENST00000418616 301 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 MTND3P2-201ENST00000438452 342 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 AC005297.2-201ENST00000450430 606 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 SDC4P-201ENST00000453285 601 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 FGF7P3-201ENST00000454645 303 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 AP000893.1-201ENST00000474462 794 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 RPL23AP41-201ENST00000484754 458 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 AC093267.1-201ENST00000489176 961 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDH1Q08174 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
PCDH1Q08174 TXNP6-201ENST00000510190 310 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 SCARNA24.1-201ENST00000516465 137 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 RN7SKP183-201ENST00000517169 324 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDH1Q08174 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms