Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNRPGP1-201ENST00000553864 222 ntBASIC3.56□□□□□ -1.84
HMGCS1Q01581 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 NF1P5-201ENST00000588287 448 ntBASIC3.56□□□□□ -1.84
HMGCS1Q01581 AC067852.4-201ENST00000590314 478 ntBASIC3.56□□□□□ -1.84
HMGCS1Q01581 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 AL713922.2-201ENST00000619384 716 ntBASIC3.56□□□□□ -1.84
HMGCS1Q01581 AL354798.1-201ENST00000622505 329 ntBASIC3.56□□□□□ -1.84
HMGCS1Q01581 AC004943.3-201ENST00000624116 600 ntBASIC3.56□□□□□ -1.84
HMGCS1Q01581 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCS1Q01581 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCS1Q01581 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC093698.1-201ENST00000423843 571 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AL390879.2-203ENST00000426943 1121 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC087385.1-201ENST00000475062 312 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 RNA5SP309-201ENST00000516670 106 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AL121766.1-201ENST00000547436 487 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 TRAV15-201ENST00000556680 249 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC010680.4-201ENST00000605334 543 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC090912.3-201ENST00000609775 533 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC006946.3-201ENST00000609791 756 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 AC055764.2-201ENST00000610089 670 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 RNF6P1-201ENST00000444889 1784 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS1Q01581 SAGE2P-201ENST00000420011 2126 ntBASIC3.55□□□□□ -1.84
HMGCS1Q01581 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS1Q01581 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 TCEA1P4-201ENST00000415066 844 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 OR4F13P-201ENST00000428478 931 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC023512.1-201ENST00000444513 499 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 HMGB1P5-202ENST00000451497 985 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC099563.1-201ENST00000456086 418 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC022034.3-201ENST00000471393 478 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 NPM1P17-201ENST00000479221 602 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC106872.2-201ENST00000494303 480 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 NPM1P41-201ENST00000512920 831 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 FTH1P9-201ENST00000513251 355 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC026402.1-201ENST00000513642 170 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 SNORA26.10-201ENST00000516427 141 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC092851.1-201ENST00000535964 478 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 CYCSP30-201ENST00000546447 172 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 CKS1BP1-201ENST00000555221 240 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC106785.1-201ENST00000565935 262 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AL356490.1-201ENST00000623079 479 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 HPVC1-201ENST00000629899 1198 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 AL163152.1-201ENST00000642001 374 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS1Q01581 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 AC138393.1-206ENST00000540997 1886 ntBASIC3.54□□□□□ -1.84
HMGCS1Q01581 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms