Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SEC61A1P61619 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A1P61619 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.16□□□□□ -1.74
SEC61A1P61619 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SEC61A1P61619 RNU6-192P-201ENST00000391253 100 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 RNU6-648P-201ENST00000410190 107 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 RNU2-42P-201ENST00000410697 113 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 VDAC1P9-201ENST00000412766 841 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A1P61619 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 DPRXP1-201ENST00000426312 460 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC244035.1-201ENST00000430042 390 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.16□□□□□ -1.74
SEC61A1P61619 RFC5P1-201ENST00000454419 874 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC010469.1-201ENST00000463864 576 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC109471.1-201ENST00000511631 612 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC010285.3-201ENST00000511668 676 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC091965.2-201ENST00000512324 613 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 RNA5SP392-201ENST00000516905 112 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.16□□□□□ -1.74
SEC61A1P61619 MTCYBP20-201ENST00000524239 1129 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC005832.3-201ENST00000537929 631 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A1P61619 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.16□□□□□ -1.74
SEC61A1P61619 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC009117.1-201ENST00000563948 554 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC104687.2-201ENST00000604442 342 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC018714.1-201ENST00000605028 208 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AL133243.1-201ENST00000614487 366 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AL158196.1-201ENST00000616786 434 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC023509.5-201ENST00000617434 807 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC099842.1-201ENST00000619919 596 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 AC090582.1-201ENST00000636321 199 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 Z99496.1-201ENST00000469424 1477 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 AC092079.1-201ENST00000558620 1985 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.16□□□□□ -1.74
SEC61A1P61619 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A1P61619 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SEC61A1P61619 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.15□□□□□ -1.74
SEC61A1P61619 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.15□□□□□ -1.74
SEC61A1P61619 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
SEC61A1P61619 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SEC61A1P61619 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SEC61A1P61619 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A1P61619 HMGB1P5-201ENST00000255320 642 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SEC61A1P61619 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SEC61A1P61619 OR5H15-201ENST00000383696 930 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SEC61A1P61619 AL121978.1-201ENST00000402778 359 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A1P61619 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.15□□□□□ -1.75
SEC61A1P61619 AC019050.1-201ENST00000418508 492 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A1P61619 AC006366.1-201ENST00000422002 759 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AC099336.2-201ENST00000422457 254 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 NPM1P24-201ENST00000428039 894 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 RPL7P4-203ENST00000430239 730 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.15□□□□□ -1.75
SEC61A1P61619 AL049745.1-201ENST00000433953 286 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A1P61619 AC008072.1-201ENST00000434254 824 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 RPL7P11-201ENST00000437586 658 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AC006466.1-201ENST00000438721 289 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AC069285.2-201ENST00000440210 275 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 TPMTP4-201ENST00000450749 678 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.15□□□□□ -1.75
SEC61A1P61619 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A1P61619 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A1P61619 AC099560.2-201ENST00000457554 255 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.15□□□□□ -1.75
SEC61A1P61619 MTND1P16-201ENST00000465177 898 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AC104689.1-201ENST00000473356 768 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AL024509.2-201ENST00000493462 493 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 RN7SL558P-201ENST00000497468 299 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 DSTNP2-201ENST00000504533 515 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 AC112198.1-201ENST00000505369 1220 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 OR7H2P-201ENST00000513483 306 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 HNRNPKP5-201ENST00000515300 253 ntBASIC4.15□□□□□ -1.75
SEC61A1P61619 Y_RNA.695-201ENST00000516715 107 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms